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Armstrong, A. Q., "GIS
applications in Environmental Health," presented to U.S. Public
Health Officers from the Division of Environmental Health, Indian
Health Service, Department of Health and Human Services, Oak Ridge
National Laboratory, Oak Ridge, Tennessee, March 12-13, 2002.
Armstrong, A. Q., B. L.
Bhaduri, and W. W. Hargrove, "Spatio-Temporal Analysis of Disease
and Environmental Data Using Statistical Tools Integrated with GIS,"
presented at Healthy People, Healthy Ecosystems Conference, International
Society of Environmental Health, Washington, D.C., June 6-11, 2002.
Baker, E. J., D. Hyatt,
B. Jackson, G.-L. Chen, D. D. Schmoyer, Y. Aydin-Son, D. McWilliams,
C. F. Baes, S. Kirov, M. D. Galloway, M. Leuze, L. Pouchard, B.
H. Jones, E. J. Michaud, C. T. Culiat, E. M. Rinchik, D. K. Johnson,
E. C. Uberbacher, D. R. Miller, F. W. Larimer, and J. R. Snoddy,
"Comparative and Collaborative Bioinformatics Systems to Promote
Mammalian Phenotype Analysis and the Elucidation of Regulatory Networks,"
presented at the Ninth DOE Contractor and Grantee Workshop, Oakland,
California, January 27-31, 2002.
Baker, E. J., B. H. Jones,
D. Hyatt, M. Shah, C. T. Culiat, M. J. Doktycz, P. R. Hoyt, D. Schmoyer,
M. Leuze, L. Pouchard, F. W. Larimer, E. M. Rinchik, E. J. Michaud,
and J. Snoddy, "Integrating Computational Analysis of Orthologous
Gene Sequences and RNA Expressions Analysis in the Mouse Skin,"
presented at the Genome Sequencing and Biology Meeting, May 2002.
Baker, E. J., D. Hyatt,
B. Jackson, G.-L. Chen, D. Schmoyer, Y. Aydin-Son, D. McWilliams,
C. F. Baes, S. Kirov, M. Galloway, M. Leuze, L. Pouchard, P. F.
LoCascio, B. H. Jones, F. W. Larimer, and J. Snoddy, "Comparative
and Collaborative Bioinformatics Required to Study the Gene Regulatory
Networks that Create Phenotypes," presented at the Genome Sequencing
and Biology Meeting, May 2002.
Barton, J. W., S. A. Jones,
C. D. Vodraska, and B. H. Davison, "Enhanced Solubility of
BTEX and Chloroorganics in High-Biomass Systems and Associated Impacts
on Biofilter Operation," presented at 2002 USC-TRG Conference
on Biofiltration, Newport Beach, California, October 30-November
1, 2002 (published in proceedings).
Bogard, J. S., "Touch of
Grey: A 20-Year Retrospective on Radiation Dosimetry," Keynote Address
presented at the Harshaw TLD Users' Group Symposium, St. Anthony
Hotel, San Antonio, Texas, May 19-23, 2002.
Bogard, J. S., "Neutron
Detection & Characterization for Non-Proliferation Applications
Using 3D Computer Optical Memories," presented at the Nuclear Arms
Reduction and Enabling Technology Program Review (DOE/NA-22, David
Spears, Program Manger), Hanford, Washington, July 16, 2002.
Borges, H. T., "Cancer
and AIDS Databases," presented to U.S. Public Health Officers from
the Division of Environmental Health, Indian Health Service, Department
of Health and Human Services, Oak Ridge National Laboratory, Oak
Ridge, Tennessee, March 12-13, 2002.
Borole, A. P. and C. Y.
Hamilton, "Enzyme Specificity during C-S Bond Cleavage in Biodesulfurization
of Petroleum Feedtocks," presented at the 24th Symposium
on Biotechnology for Fuels and Chemicals, Gatlinburg, Tennessee,
April 28-May 1, 2002 (poster session).
Brothers, R. A., "History
of ORNL/HIS Interactions and Future Prospects," presented to U.S.
Public Health Officers from the Division of Environmental Health,
Indian Health Service, Department of Health and Human Services,
Oak Ridge National Laboratory, Oak Ridge, Tennessee, March 12-13,
2002.
Chen, C.-H., S. L. Allman,
K. J. Matteson, and L. Sammartano, "Laser Desorption Mass Spectrometry
for DNA Sequencing and Hybridization Detection," presented at the
Ninth DOE Contractor and Grantee Workshop, Oakland, California,
January 27-31, 2002.
Culiat, C. T., "Nell1: A Candidate Gene for ENU-Induced Recessive Lethal
Mutations at the I7R6
Locus and Potential Mouse Models for Human Neonatal Unilateral Coronal
Synostosis (UCS)," presented at the Ninth DOE Contractor and Grantee
Workshop, Oakland, California, January 27-31, 2002 poster
session)
Culiat, C. T., "Mutation
Scanning and Candidate Gene Verification in the ORNL Regional ENU-Mutagenesis
Program," presented to Virginia Polytechnic Institute and State
University Faculty, Oak Ridge National Laboratory, Oak Ridge, Tennessee,
February 15, 2002.
Culiat, C. T., "Functional
Annotation of the Human Genome Using the ORNL Mutant and Inbred
Mouse Strain Resource," presented at the UT/ORNL Genome Science
and Technology Colliquium, Knoxville, Tennessee, February 21, 2002.
Culiat, C. T., "Functional
Annotation of Human Genome Sequence Using Mutant Mouse Models,"
presented at Duke University Medical Center, Durham, North Carolina,
May 1, 2002 (Invited).
Culiat, C. T., "Nell1, A Gene Coding for a Novel Protein Kinase C-binding
Protein is a Candidate for Late Gestation Recessive Lethal Mutations
at the I7R6 Locus," presented at the Southeast Regional Meeting
of the Society for Developmental Biology, Gatlinburg, Tennessee,
May 29-31, 2002 (poster session).
Culiat, C. T., Q. Li, M.
L. Klebig, D. K. Johnson, Z. Liu, H. Monroe, B. Stanford, T. Lu,
L. Hughes, M. Kerley, D. Carpenter, L. Webb, and E. M. Rinchik,
"Mutation Scanning and Candidate-Gene Verification in the ORNL Regional
ENU-Mutagenesis Program," presented at the UT/ORNL Graduate School
of Genome Science and Technology Retreat, Knoxville, Tennessee,
May 1, 2002 (poster session).
Culiat, C. T., "High-throughput
Identification of Point Mutations in the Mouse Genome Using Temperature
Gradient Capillary Electrophoresis (TGCE)," presented at the DOE
Office of Science On-Site Review of the ORNL Institutional Plan,
Oak Ridge National Laboratory, Oak Ridge, Tennessee, August 9, 2002
(Invited).
Dale, V., S. Bartell, J.
Sorensen, and R. A. Brothers, "A Systems Approach to Ecosystem Health,"
presented at Healthy People, Healthy Ecosystems Conference, International
Society of Environmental Health, Washington, D.C., June 6-11, 2002.
Doktycz, M. J., "Applications
of Picoliter and Nanoliter Fluid handling and Arraying," presented
at SPIE, Photonics West Conference, San Jose, California, January
2002.
Doktycz, M. J., L. Zhang,
A. Meleshko, V. Merkulov, M. Guillorn, D. H. Lowndes, and M. Simpson,
"Nanoengineered Membranes for Controlled Transport," presented at
the Joint DARPA BioFlips/Simbiosys PI Meeting, Miami Beach, Florida,
February 20-22, 2002.
Doktycz, M. J., "Microarrays
and Related Technologies," presented to the Triangle Array Users
Group, North Carolina Biotechnology Center, Raleigh-Durham, North
Carolina, April 4, 2002.
Doktycz, M. J., "Analytical
Technology Developments for Genomics," presented at Pacific Northwest
National Laboratory, May 15, 2002 (Invited).
Doktycz, M. J., L. Zhang,
L. M. Penn, P. F. Brigg, M. A. Guillorn, A. V. Melechko, V. I. Merkulov,
T. E. McKnight, D. H. Lowndes, and M. L. Simpson, "Nanofiber Structures
for Molecular Assembly and Controlled Transport," presented at the
Scanning Probe Microscopy Sensors and Nanostructures Conference,
Las Vegas, Nevada, May 28, 2002.
Doktycz, M. J., L. Zhang,
L. M. Penn, P. F. Britt, M. A. Guillorn, A. V. Melechko, V. I. Merkulov,
T. E. McKnight, D. H. Lowndes, and M. L. Simpson, "Nanofiber
Structures as Mimics for Cellular Structures," presented at
the JPL In Situ Instruments Workshop, Pasadena, California,
June 2002.
Doktycz, M. J., "Macro-,
micro- and nano-technologies for genomics," presented to the
Department of Chemistry and Biochemistry, University of Mississippi,
Oxford, Mississippi, September 2002 (Invited).
Forsyth, C. S. and P. H.
Reno, "Tar Creek: A Proposal to NIEHS to Assess Heavy Metal Toxicity
to Native Americans via Culture-Specific Routes," presented to U.S.
Public Health Officers from the Division of Environmental Health,
Indian Health Service, Department of Health and Human Services,
Oak Ridge National Laboratory, Oak Ridge, Tennessee, March 12-13,
2002.
Galloway, L. B. and C.
F. Baes, "User Interfaces for Environmental Databases," presented
to U.S. Public Health Officers from the Division of Environmental
Health, Indian Health Service, Department of Health and Human Services,
Oak Ridge National Laboratory, Oak Ridge, Tennessee, March 12-13,
2002.
Hingerty, B., M. Cosman,
D. J. Patel, and S. Broyde, "Molecular Views of Carcinogen
Damaged DNA," presented at the 7th World Congress on Advances
in Oncology and the 5th International Symposium on Molecular Medicine,
Hersonissos, Crete, Greece, October 10-12, 2002. (Invited; Session
co-chair of the Epidemiology and Carcinogenesis session)
Hu, Z., T. Seeley, S. Kossek,
and T. G. Thundat, "Reliable Method for Calibration of Optical Cantilever
Deflection Detection Systems," presented at the Scanning Probe Microscopy
Sensors and Nanostructures Conference, Las Vegas, Nevada, May 28,
2002.
Hurst, G. B., R. L. Hettich,
J. L. Stephenson, P. F. Britt, M. Sega, J. Lewis, P. K. Lankford,
M. V. Buchanan, E. C. Uberbacher, Y. Xu, D. Xu, J. Razumovskaya,
and V. N. Olman, "Investigating Protein Complexes by Crosslinking
and Mass Spectrometry," presented at the Ninth DOE Contractor and
Grantee Workshop, Oakland, California, January 27-31, 2002.
Hyatt, D., F. W. Larimer,
P. F. LoCascio, V. N. Olman, M. B. Shah, Y. Xu, and E. C. Uberbacher,
"GrailEXP": Gene Recognition Using Neural Networks and Similarity
Search," presented at the Ninth DOE Contractor and Grantee Workshop,
Oakland, California, January 27-31, 2002.
Johnson, D. K. and K. Goss,
"Behavior Core," presented at the Tennessee Mouse Genome Consortium
Retreat, Knoxville, Tennessee, December 5-6, 2001.
Johnson, D. K., "Mammalian
and Genetics Research at ORNL," presented to Carl Kohrt, CEO Battelle,
Oak Ridge National Laboratory, Oak Ridge, Tennessee, January 3,
2002.
Johnson, D. K., E. M. Rinchik,
P. R. Hunsicker, S. G. Shinpock, K. J. House, D. J. Carpenter, G.
D. Shaw, W. Packan, E. J. Michaud, B. L. Alspaugh, and L. B. Russell,
"Resource Archiving and Distribution via the Mutant Mouse Database
and the Cryopreservation Program at Oak Ridge National Laboratory,"
presented at the Ninth DOE Contractor and Grantee Workshop, Oakland,
California, January 27-31, 2002.
Johnson, D. K., "ORNL's
Mouse-Genetics Core Program," presented to Virginia Polytechnic
Institute and State University Faculty, Oak Ridge National Laboratory,
Oak Ridge, Tennessee, February 15, 2002.
Johnson, D. K., "Using Mice
to Study How Genes Work," presented to the UT Golden Grads at D.
J. Nelson Auditorium, Oak Ridge National Laboratory, Oak Ridge,
Tennessee, May 10, 2002 (Invited).
Johnson, D. K., "The Role
of the Mouse as a Model for Studing Human Gene Function," presented
to the East Tennessee Regional Leadership Association Class of 2002,
Oak Ridge National Laboratory, Oak Ridge, Tennessee, July 24, 2002
(Invited).
Johnson, D. K., "Using Mice
to Study How Genes Work," presented at a seminar for summer students,
Oak Ridge National Laboratory, Oak Ridge, Tennessee, July 31, 2002
(Invited).
Johnson, D. K., "Resource
Archiving and Distribution via the Mutant Mouse Database and the
Cryopreservation Program at the Oak Ridge National Laboratory,"
poster presented at the Complex Biology Initiative Review, Oak Ridge,
Tennessee, August 1, 2002.
Johnson, D. K., "The Role
of ORNL's Mouse Genetics Program in Complex Biology for the Future,"
presented at the DOE Office of Science On-Site Review of the ORNL
Institutional Plan, Oak Ridge National Laboratory, Oak Ridge, Tennessee,
August 9, 2002 (Invited).
Johnson, D. K., "Using
mice to determine the functions of human genes," presented
to the Tennessee Valley Chapter of the American Vacuum Society held
at Rothchild's, Knoxville, Tennessee, October 8, 2002. (Invited)
Johnson, D. K. "The
Role of Mouse Genetics and Genomics Program in ORNL's Complex Biological
Systems Initiative," presented at Pacific Northwest National
Laboratory, Fundamental Science Directorate, EMSL Auditorium, Richland,
Washington, September 16, 2002. (Invited)
Johnson, D. K., "Mice
can help!" presented to students of the Biology Club at Webb
School, Knoxville, Tennessee, October 17, 2002. (Invited)
Johnson, D. K., "Using
Mice to Determine What Genes Do,"presented to the Fall semester
students, Oak Ridge National Laboratory, Oak Ridge, Tennessee, October
30, 2002. (Invited)
Johnson, D. K., "The role of mice in biological
research," presented to Leadership Team Spouses, Oak Ridge
National Laboratory, Oak Ridge, Tennessee, November 11, 2002 (invited).
Jones, B. H., "Microarray
Analysis of Gene Networks," presented to Virginia Polytechnic Institute
and State University Faculty, Oak Ridge National Laboratory, Oak
Ridge, Tennessee, February 15, 2002.
Jones, B. H., "Hairy Issues:
Using Mouse Models of Skin and Hair Pathology to Understand Gene
Regulatory Networks in Complex Organisms," presented at the Center
for Bioinformatics and Computational Biology, Duke University, Durham,
North Carolina, April 3, 2002 (Invited).
Jones, B. H., J. R. Snoddy,
E. J. Baker, D. P. Hyatt, D. D. Schmoyer, L. C. Pouchard, and M.
R. Leuze, "Elucidating Eukaryotic Gene Regulatory Networks," presented
at the UT/ORNL Graduate School of Genome Science and Technology
Retreat, Knoxville, Tennessee, March 1, 2002 (poster session).
Jones, B. H., J. R. Snoddy,
E. J. Baker, D. P. Hyatt, D. D. Schmoyer, L. C. Pouchard, and M.
R. Leuze, "Elucidating Eukaryotic Gene Regulatory Networks," presented
at the Ninth DOE Contractor and Grantee Workshop, Oakland, California,
January 27-31, 2002 (Invited Poster).
Jones, B. H., "Elucidating gene regulatory
networks involved in hair and skin physiology by integrating experimental
and computational approaches," presented at the International Mouse
Genome Society Meeting, San Antonio, Texas, November 17-21, 2002.
Klasson, T. K. and N. P.
Nghiem, "Energy Production from Zoo Animal Wastes," presented at
the 24th Symposium on Biotechnology for Fuels and Chemicals,
Gatlinburg, Tennessee, April 28-May 1, 2002 (poster session).
Klasson, K. T. and B. H.
Davison, "A General Methodology for Evaluation of Carbon Dioxide
Sequestration Activities," presented at the Nineteenth Annual
International Pittsburgh Coal Conference," Pittsburgh, Pennsylvania,
September 23-27, 2002 (published in proceedings).
Klebig, M. L., E. Johnson,
M. Hill, M. Kerley, L. Rainwater, and E. M. Rinchik, "Mice Hemizygous
for ENU-Induced Mutations at the fit1 Locus have DNA Sequence and Structural
Alterations in Calm,
a Gene for a Clathrin-Assembly Protein," presented at the UT/ORNL
Graduate School of Genome Science and Technology Retreat, Knoxville,
Tennessee, March 1, 2002 (poster session).
Klebig, M., E. Johnson,
M. Hill, M. Kerley, L. Rainwater, and E. M. Rinchik, "Mise Hemizygous
for ENU-Induced Mutations at the fit1
Locus have DNA Sequence and Structural Alternations in Calm,
a Gene for a Clathrin-Assembly Protein," DOE Review of the ORNL
Complex Systems Biology Program, Oak Ridge, Tennessee, August 1,
2002 (poster).
Kulkarni, S. R. and A. B.
Pandit, "Modification of Lipase for the Hydrolysis of Castor Oil,"
presented at the 24th Symposium on Biotechnology for
Fuels and Chemicals, Gatlinburg, Tennessee, April 29, 2002 (poster
session and oral presentation).
Land, M. L., F. W. Larimer,
J. R. Snoddy, D. D. Schmoyer, D. Hyatt, M. B. Shah, I. Vokler, P.
F. LoCascio, G.-L. Chen, L. Hauser, and E. C. Uberbacher, "The Genome
Channel: A Foundation for Genomes to Life and Comparative Genomics,"
presented at the Ninth DOE Contractor and Grantee Workshop, Oakland,
California, January 27-31, 2002.
Land, M. L., F. W. Larimer,
L. Hauser, D. D. Schmoyer, G.-L. Chen, D. Hyatt, M. Shah, I. Vokler,
P. F. LoCascio, J. R. Snoddy, and E. C. Uberbacher, "The Genome
Channel: Annotation and Display from Multiple Gene Modelers," presented
at the Genome Sequencing and Biology Meeting, May 2002.
Larimer, F. W., L. Hauser,
M. L. Land, D. Hyatt, M. B. Shah, S. Stilwagen, P. Predki, D. Arp,
A. Hooper, S. Chisholm, G. Rocap, B. Palenik, J. Waterbury, R. Atlas,
J. Meeks, C. Harwood, R. Tabita, P. Chain, and J. Lamerdin, "Annotation
of Microbial Genomes Relevant to DOE's Carbon Management and Sequestration
Program," presented at the Ninth DOE Contractor and Grantee Workshop,
Oakland, California, January 27-31, 2002.
Larimer, F. W., L. Hauser,
M. L. Land, D. Hyatt, M. B. Shah, P. F. LoCascio, E. C. Uberbacher,
and I. Vokler, "Annotation of Draft Microbial Genomes," presented
at the Ninth DOE Contractor and Grantee Workshop, Oakland, California,
January 27-31, 2002.
Leuze, M. R. and B. H.
Jones, "Comparative methods for identification of genomic regulatory
regions," presented at the C. Warren Neel Conference: The New Frontiers
of Statistical Data Mining, Knowledge Discovery, and E-Business,
Knoxville, Tennessee, June 25, 2002 (Invited).
Liu, Y., "Genetic Dissection
of the Roles of the Telomerase/Vault Associated Proteins in vivo,"
presented at The University of Tennessee's Biological,
Cellular, and Molecular Biology Retreat, Fall Creek Falls State
Park, Pikeville, Tennessee, May 10-11, 2002 (Invited).
Liu, Y., "Genetic Dissection
of the Roles of Two Vault Associated Proteins, in Telomerase Function,
in vivo," presented at the First International Meeting of the
International Vault Research Group, Amsterdam, The Netherlands,
May 16-17, 2002 (Invited).
LoCascio, P. F., D. Hyatt,
F. W. Larimer, M. B. Shah, I. Vokler, and E. C. Uberbacher, "Beyond
Terascale Biological Computing: GIST and Genomes to Life," presented
at the Ninth DOE Contractor and Grantee Workshop, Oakland, California,
January 27-31, 2002.
LoCascio, P. F., N. Doggett,
E. Baker, D. Hyatt, M. Shah, D. D. Schmoyer, F. W. Larimer, J. R.
Snoddy, and E. C. Uberbacher, "U.S. Department of Energy National
Laboratories Collaborative High Throughput Genome Analysis Framework,"
presented at the Genome Sequencing and Biology Meeting, May 2002.
LoCascio, P. F., E. Baker,
D. Hyatt, M. Shah, D. D. Schmoyer, M. L. Land, F. W. Larimer, J.
R. Snoddy, and E. C. Uberbacher, "An Ontological Framework for Terascale
Biological Computing," presented at the Genome Sequencing and Biology
Meeting, May 2002.
McGinn, C. W., "Assessing
Health Risks of Upstream and Downstream Wastes," presented to the
Petroleum Environmental Research Forum Quarterly Meeting, San Ramon,
California, February 2002.
McGinn, C. W., "Risk and
Regulatory Analysis Overview," presented to U.S. Public Health Officers
from the Division of Environmental Health, Indian Health Service,
Department of Health and Human Services, Oak Ridge National Laboratory,
Oak Ridge, Tennessee, March 12-13, 2002.
McGinn, C. W., "Cultural
Impact Evaluation: Quality of Life," presented to U.S. Public Health
Officers from the Division of Environmental Health, Indian Health
Service, Department of Health and Human Services, Oak Ridge National
Laboratory, Oak Ridge, Tennessee, March 12-13, 2002.
Michaud, E. J., "Genome-Wide,
Gene-Driven Chemical Mutagenesis: The ORNL Cryopreserved Mutant
Mouse Bank," presented at the 2002 ORNL LDRD Proram Review and Meeting
on Implementation of the New LDRD Reporting Requirements, Oak Ridge
National Laboratory, Oak Ridge, Tennessee, May 16, 2002 (Invited).
Michaud, E. J., "Genome-wide,
Gene-driven Chemical Mutagenesis: The ORNL Cyropreserved Mutant
Mouse Bank," presented at the Workshop on the ENU Mutagenesis: Planning
for Saturation, Westfield's Marriott Conference Center, Chantilly,
Virginia, July 25-28, 2002 (Invited).
Miller, D. R. (presenter),
E. M. Rinchik, K. Goss, D. K. Johnson, J. Snoddy, E. Baker, M. Ferkin,
K. Hamre, D. Matthews, G. Mittleman, M. Jablonski, R. Williams,
D. Goldowitz, and the Tennessee Mouse Genome Consortium, "Mutagenesis
and Phenotyping for Abnormalities of Behavior and the Central Nervous
System by the Tennessee Mouse Genome Consortium," presented
at the Mouse Initiative IV Workshop at the Jackson Laboratory, Bar
Harbor, Maine, August 3, 2002. (Invited).
Olman, V. N., D. Xu, and
Y. Xu (presenter), "Identification of regulatory binding sites using
minimum spanning trees," presented at the C. Warren Neel Conference:
The New Frontiers of Statistical Data Mining, Knowledge Discovery,
and E-Business, Knoxville, Tennessee, June 25, 2002 (Invited).
Passian, A., G. Muralidharan,
A. Mehta, T. L. Ferrell, and T. G. Thundat, "Manipulation of the
Microcantilever Oscillations," presented at the Scanning Probe Microscopy
Sensors and Nanostructures Conference, Las Vegas, Nevada, May 26-29,
2002 (poster session).
Passian, A., A. Wig, T.
L. Ferrell, and T. G. Thundat, "Knudsen Forces on Microcantilevers,"
presented at the Scanning Probe Microscopy Sensors and Nanostructures
Conference, Las Vegas, Nevada, May 28, 2002.
Passovets, S., M. B. Shah,
L. Wang, D. Xu, and Y. Xu, "A Computational Pipeline for Genome-Scale
Analysis of Protein Structures and Functions," presented at the
Ninth DOE Contractor and Grantee Workshop, Oakland, California,
January 27-31, 2002.
Rinchik, E. M., "Mouse
Models and Susceptibility," presented at the DOE Briefing on Bioterrorism
Defense Capabilities, Washington, D.C., February 27, 2002 (Invited).
Rinchik, E. M., D. A. Carpenter,
Y. You, P. R. Hunsicker, D. R. Miller, and D. K. Johnson, "Functional
Annotation of Mammalian DNA Sequence by Large-Scale Phenotype-Driver
Recovery of Mouse Mutagens," presented at the 32nd Annual
Meeting of the Environmental Mutagen Society, San Diego, California,
March 16-21, 2002.
Rinchik, E. M., "Phenotype- and Gene-Driven
Chemical Mutagenesis of the Mouse Germline," presented at the
Department of Pathology, Yale University School of Medicine, April 23, 2002
(Invited).
Rinchik, E. M., "Phenotype-Driven
Mutagenesis at the Oak Ridge National Laboraotry: Screens for Developmental,
Neurobehavioral, and Imprinting Defects," presented at the Southeast
Regional Meeting of the Socity for Developmental Biology, Gatlinburg,
Tennessee, May 29-31, 2002.
Rinchik, E. M., "The Role
of the Mouse Genetics and Genomics Program in ORNL's Complex Biological
Systems Initiative," presented at the Complex Biology Systems Initiative
Review, Oak Ridge National Laboratory, August 1, 2002 (Invited).
Rinchik, E. M. "There are at least two ways of studying genome and cellular
responses to exposures," "Creating the CMMB," "CMMB
Progress," and "Two ORNL research areas potentially relevant
to host-pathogen studies," presented at the Chlamydia and Francisella
Workshops, Santa Fe and Los Alamos, New Mexico, October 23-25, 2002.
(Invited)
Shah, M. B., D. Hyatt,
F. W. Larimer, P. F. LoCascio, I. Vokler, and E. C. Uberbacher,
"The ORNL Genome Analysis Toolkit, Pipeline, and DAS Server," presented
at the Ninth DOE Contractor and Grantee Workshop, Oakland, California,
January 27-31, 2002.
Stewart, R. N., "Spatial
Analysis and Decision Analysis (SADA)," presented to U.S. Public
Health Officers from the Division of Environmental Health, Indian
Health Service, Department of Health and Human Services, Oak Ridge
National Laboratory, Oak Ridge, Tennessee, March 12-13, 2002.
Thundat, T. G., "Micromechanical
Sensors," presented at the Department of Electrical Engineering
Colloquium, Arizona State University, Tempe, Arizona, February 15,
2002 (Invited).
Thundat, T. G., "Micromechanical
Sensors," presented at the Metals and Ceramics Division Seminar
Series, Oak Ridge National Laboratory, Oak Ridge, Tennessee, February
28, 2002 (Invited).
Thundat, T. G., "Microcantilever
Biosensors," presented at the 2002 Materials Research Society Spring
Meeting, San Francisco, California, April 1-5, 2002.
Thundat, T. G., "Detection
of Terrorist Threats Using Macrocantilever Platform," presented
at the Scanning Probe Microscopy Sensors and Nanostructures Conference,
Las Vegas, Nevada, May 28, 2002 (Invited).
Thundat, T. G., "Molecular Recognition
Using Micromechanical Sensors," presented to State University
of New York Physics Department, November 15, 2002 (invited).
Thundat, T. G., "Detection of terrorist threats using microcantilever
platform," presented at Lawrence Livermore National Laboratory, Livermore, California, December 7, 2002 (invited).
Thundat, T. G., R. J. Warmack, P. G. Datskos, "Low-Power Capacitive
Sensor Arrays," presented at DARPA/MTO Micro Gas Analyzers Meeting, Monterey, California, December 16, 2002 (invited).
Uberbacher, E. C., F. W.
Larimer, R. L. Hettich, G. B. Hurst, M. V. Buchanan, D. Xu, and
Y. Xu, "A Pilot Project for a Protein Complex Factory," presented
at the Ninth DOE Contractor and Grantee Workshop, Oakland, California,
January 27-31, 2002.
Wang, Y., "Genetic and
Biochemical Characterization of Cul1 and Cdc14
in Cell Cycle Regulation," presented at the University
of Tennessee's Biological, Cellular, and Molecular Biology Retreat,
Fall Creek Falls State Park, Pikeville, Tennessee, May 10-11,
2002 (Invited).
Watson, A. P. and R. H.
Ross, "Hazard Assessment for DOD: Past, Present, and Future," presented
at the Life Sciences Division Brown-Bag Seminar, Oak Ridge National
Laboratory, Oak Ridge, Tennessee, March 12, 2002.
Wig, A., A. Passian, X.
Zhu, M. George, T. L. Ferrell, and T. G. Thundat, "Coatingless Chemical
Detection Using Optical Excitation of Surface States on Microcantilevers,"
presented at the Scanning Probe Microscopy Sensors and Nanostructures
Conference, Las Vegas, Nevada, May 26-29, 2002 (poster session).
Xu, D., D. Kim, C. Secrest,
V. N. Olman, and Y. Xu, "Protein Structure Predictions by PROSPECT,"
presented at the Ninth DOE Contractor and Grantee Workshop, Oakland,
California, January 27-31, 2002 (Invited).
Xu, D., "Computational
Studies of Biological Pathways," presented at Ceres, Inc., California,
May 31, 2002 (Invited).
Xu, Y., V. N. Olman, and
D. Xu, "Minimum Spanning Trees for Gene Expression Data Clustering,"
presented at the Twelfth International Conference on Genome Informatics
(GIW 2001), Tokyo, Japan, December 17, 2001 (Invited).
Xu, Y., D. Xu, D. Kim,
and O. H. Crawford, "Protein Structure Determination Through Combining
Protein Threading and Sparse NMR Data," presented at the Ninth DOE
Contractor and Grantee Workshop, Oakland, California, January 27-31,
2002.
Xu, Y., D. Xu, V. N. Olman,
and L. Wang, "EXCAVATOR: Gene Expression Data Analysis Using Minimum
Spanning Trees," presented at the Ninth DOE Contractor and Grantee
Workshop, Oakland, California, January 27-31, 2002.
Xu, Y., "Genome-scale protein
structure predictions using PROSPECT," presented at the Southeast
Structural Genomics Center, University of George at Athens, June
17, 2002 (Invited).
Xu, Y., "Computational
Studies of Structure, Function, and Pathway: Bridging the Gap between
High-Throughput Data and Traditional Biology," presented at Genentech,
Inc., California, August 13, 2002.
Xu, Y., "An Efficient Branch-and-Bound
Algorithm for the Assignment of Protein Backbone NMR Peaks," presented
at the IEEE Computer Society Bioinformatics Conference (CSB2002),
Stanford University, California, August 15, 2002.
Xu, Y., "High-throughput
protein structure prediction and modeling using PROSPECT,"
presented at the Department of Biochemistry and Molecular Biology,
Michigan State University, October 17, 2002. (Invited)
Xu, Y., "Protein
Structure Predictions using PROSPECT," presented at the Biochemistry
Department, Mississippi State University, September 16, 2002. (Invited)
Xu, Y., "Combinatorial
optimization algorithms for regulatory binding site identification,"
presented at the Computer Science Department, Sandia National Laboratory,
August 19, 2002. (Invited)
Xu, Y., "A combinatorial
optimization framework for biological data clustering," presented
at the SIAM Conference on Discrete Mathematics, August 12, 2002.
(Invited)
You, Y., "Analysis of Embryonic
Lethal Mutations," presented to Virginia Polytechnic Institute and
State University Faculty, Oak Ridge National Laboratory, Oak Ridge,
Tennessee, February 15, 2002.
You, Y., H. H.-J. Chao,
S. J. Mentzer, W. S.-H. Chick, B. L. Alspaugh, D. A. Carpenter,
G. D. Shaw, D. Goldowitz, and E. M. Rinchik, "Characterization of
Recessive Lethal Mutations Derived from ENU Mutagenesis Projects
at ORNL," presented at the Southeast Regional Meeting of the Society
for Developmental Biology, Gatlinburg, Tennessee, May 29-31, 2002
(poster session).
Zhou, J., F. W. Larimer,
J. M. Tiedje, K. H. Nealson, R. Smith, T. Palzkill, B. O. Palsson,
C. Giometti, D. Xu, M. Lipton, A. S. Beliaev, D. K. Thompson, M.
W. Fields, J. R. Cole, and J. Klappenbach, "Integrated Analysis
of Protein Complexes and Regulatory Networks Involved in Anaerobic
Energy Metabolism and Shewanella oneidensis MR-1,"
presented at the Ninth DOE Contractor and Grantee
Workshop, Oakland, California, January 27-31, 2002.
1997-98 Life Sciences Division Progress
Report
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